precursor_groups_80587

Back to index

Entry name: precursor_groups_80587
Common denominator: Precursor BLAST
Number of operons: 2
Average COG: 0.20 +- 0.17

Precursor alignment

Common protein domains
Domain ID	Domain name	Times found
TIGR03346	ATP-dependent chaperone protein ClpB	2/2
TIGR02350	chaperone protein DnaK	2/2
TIGR01068	thioredoxin	2/2
PF17871	AAA lid domain	2/2
PF13591	MerR HTH family regulatory protein	2/2
PF10431	C-terminal, D2-small domain, of ClpB protein	2/2
PF07992	Pyridine nucleotide-disulphide oxidoreductase	2/2
PF07724	AAA domain (Cdc48 subfamily)	2/2
PF02861	Clp amino terminal domain, pathogenicity island component	2/2
PF02148	Zn-finger in ubiquitin-hydrolases and other protein	2/2
PF01556	DnaJ C terminal domain	2/2
PF01025	GrpE	2/2
PF00226	DnaJ domain	2/2
PF00085	Thioredoxin	2/2
PF00027	Cyclic nucleotide-binding domain	2/2
PF00012	Hsp70 protein	2/2
PF00004	ATPase family associated with various cellular activities (AAA)	2/2
TIGR00630	excinuclease ABC subunit A	1/2
PF17755	UvrA DNA-binding domain	1/2
PF13515	Fusaric acid resistance protein-like	1/2
PF12805	FUSC-like inner membrane protein yccS	1/2
PF01411	tRNA synthetases class II (A)	1/2
PF00005	ABC transporter	1/2

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains	Nr of known RiPP domains
Streptomyces_RBGC_90654	21.666666666666664	15	None found	0.18 +- 0.02	True	17 PF00004 PF00012 PF00027 PF00085 PF00226 PF01025 PF01556 PF02148 PF02861 PF07724 PF07992 PF10431 PF13591 PF17871 TIGR01068 TIGR02350 TIGR03346	0
Streptomyces_RBGC_250605	24.074074074074073	18	None found	0.21 +- 0.21	True	23 PF00004 PF00005 PF00012 PF00027 PF00085 PF00226 PF01025 PF01411 PF01556 PF02148 PF02861 PF07724 PF07992 PF10431 PF12805 PF13515 PF13591 PF17755 PF17871 TIGR00630 TIGR01068 TIGR02350 TIGR03346	0