precursor_jaccard_groups_14370

Back to index

Entry name: precursor_jaccard_groups_14370
Common denominator: Overlap in jaccard and precursor pairs
Number of operons: 3
Average COG: 0.12 +- 0.23

Common protein domains
Domain ID	Domain name	Times found
TIGR04339	PQQ system protein	3/3
TIGR03859	coenzyme PQQ biosynthesis protein PqqD	3/3
TIGR03075	PQQ-dependent dehydrogenase, methanol/ethanol family	3/3
TIGR02111	coenzyme PQQ biosynthesis protein C	3/3
TIGR02109	coenzyme PQQ biosynthesis enzyme PqqE	3/3
TIGR02107	coenzyme PQQ precursor peptide PqqA	3/3
TIGR00198	catalase/peroxidase HPI	3/3
PF13360	PQQ-like domain	3/3
PF13186	Iron-sulfur cluster-binding domain	3/3
PF08042	PqqA family	3/3
PF05402	Coenzyme PQQ synthesis protein D (PqqD)	3/3
PF04397	LytTr DNA-binding domain	3/3
PF04055	Radical SAM superfamily	3/3
PF03070	TENA/THI-4/PQQC family	3/3
PF00141	Peroxidase	3/3

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains	Nr of known RiPP domains
Streptomyces_RBGC_78901	36.61971830985916	19	None found	0.14 +- 0.22	True	15 PF00141 PF03070 PF04055 PF04397 PF05402 PF08042 PF13186 PF13360 TIGR00198 TIGR02107 TIGR02109 TIGR02111 TIGR03075 TIGR03859 TIGR04339	8
Streptomyces_RBGC_365172	50.48543689320389	19	None found	0.10 +- 0.24	True	15 PF00141 PF03070 PF04055 PF04397 PF05402 PF08042 PF13186 PF13360 TIGR00198 TIGR02107 TIGR02109 TIGR02111 TIGR03075 TIGR03859 TIGR04339	8
Streptomyces_RBGC_675258	37.66423357664233	19	None found	0.13 +- 0.23	True	15 PF00141 PF03070 PF04055 PF04397 PF05402 PF08042 PF13186 PF13360 TIGR00198 TIGR02107 TIGR02109 TIGR02111 TIGR03075 TIGR03859 TIGR04339	8