precursor_jaccard_groups_4727

precursor_jaccard_groups_4727

Back to index

Entry name: precursor_jaccard_groups_4727
Common denominator: Overlap in jaccard and precursor pairs
Number of operons: 9
Average COG: 0.12 +- 0.28

Common protein domains
Domain ID	Domain name	Times found
TIGR01727	oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain	9/9
PF13385	Concanavalin A-like lectin/glucanases superfamily	9/9
PF13088	BNR repeat-like domain	9/9
PF12911	N-terminal TM domain of oligopeptide transport permease C	9/9
PF08352	Oligopeptide/dipeptide transporter, C-terminal region	9/9
PF02446	4-alpha-glucanotransferase	9/9
PF01120	Alpha-L-fucosidase	9/9
PF00884	Sulfatase	9/9
PF00701	Dihydrodipicolinate synthetase family	9/9
PF00528	Binding-protein-dependent transport system inner membrane component	9/9
PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle	9/9
PF00005	ABC transporter	9/9

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains	Nr of known RiPP domains
Streptomyces_RBGC_347176	150.69026548672568	21	None found	0.16 +- 0.28	True	12 PF00005 PF00496 PF00528 PF00701 PF00884 PF01120 PF02446 PF08352 PF12911 PF13088 PF13385 TIGR01727	0
Streptomyces_RBGC_280492	330.00000000000006	22	None found	0.11 +- 0.27	True	12 PF00005 PF00496 PF00528 PF00701 PF00884 PF01120 PF02446 PF08352 PF12911 PF13088 PF13385 TIGR01727	0
Streptomyces_RBGC_366838	323.77358490566036	22	None found	0.11 +- 0.28	True	12 PF00005 PF00496 PF00528 PF00701 PF00884 PF01120 PF02446 PF08352 PF12911 PF13088 PF13385 TIGR01727	0
Streptomyces_RBGC_454823	213.16770186335404	21	None found	0.11 +- 0.28	True	12 PF00005 PF00496 PF00528 PF00701 PF00884 PF01120 PF02446 PF08352 PF12911 PF13088 PF13385 TIGR01727	0
Streptomyces_RBGC_552249	213.16770186335404	21	None found	0.11 +- 0.28	True	12 PF00005 PF00496 PF00528 PF00701 PF00884 PF01120 PF02446 PF08352 PF12911 PF13088 PF13385 TIGR01727	0
Streptomyces_RBGC_10107	150.69026548672568	21	None found	0.16 +- 0.28	True	12 PF00005 PF00496 PF00528 PF00701 PF00884 PF01120 PF02446 PF08352 PF12911 PF13088 PF13385 TIGR01727	0
Streptomyces_RBGC_111975	205.15662650602408	21	None found	0.12 +- 0.28	True	12 PF00005 PF00496 PF00528 PF00701 PF00884 PF01120 PF02446 PF08352 PF12911 PF13088 PF13385 TIGR01727	0
Streptomyces_RBGC_659589	271.18248175182475	22	t1pks-nrps (partial overlap)	0.09 +- 0.27	True	12 PF00005 PF00496 PF00528 PF00701 PF00884 PF01120 PF02446 PF08352 PF12911 PF13088 PF13385 TIGR01727	0
Streptomyces_RBGC_17024	264.0	21	None found	0.09 +- 0.26	True	12 PF00005 PF00496 PF00528 PF00701 PF00884 PF01120 PF02446 PF08352 PF12911 PF13088 PF13385 TIGR01727	0