precursor_jaccard_groups_8767

Back to index

Entry name: precursor_jaccard_groups_8767
Common denominator: Overlap in jaccard and precursor pairs
Number of operons: 5
Average COG: 0.02 +- 0.02

Common protein domains
Domain ID	Domain name	Times found
TIGR02151	isopentenyl-diphosphate delta-isomerase, type 2	5/5
TIGR01835	hydroxymethylglutaryl-CoA synthase	5/5
TIGR01240	diphosphomevalonate decarboxylase	5/5
TIGR01220	phosphomevalonate kinase	5/5
TIGR00549	mevalonate kinase	5/5
PF18376	Mevalonate 5-diphosphate decarboxylase C-terminal domain	5/5
PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III	5/5
PF08544	GHMP kinases C terminal	5/5
PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal	5/5
PF08540	Hydroxymethylglutaryl-coenzyme A synthase C terminal	5/5
PF01593	Flavin containing amine oxidoreductase	5/5
PF01154	Hydroxymethylglutaryl-coenzyme A synthase N terminal	5/5
PF01070	FMN-dependent dehydrogenase	5/5
PF00368	Hydroxymethylglutaryl-coenzyme A reductase	5/5
PF00348	Polyprenyl synthetase	5/5
PF00288	GHMP kinases N terminal domain	5/5

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains
Streptomyces_RBGC_407555	532.125	23	terpene (partial overlap)	0.02 +- 0.02	True	16 PF00288 PF00348 PF00368 PF01070 PF01154 PF01593 PF08540 PF08541 PF08544 PF08545 PF18376 TIGR00549 TIGR01220 TIGR01240 TIGR01835 TIGR02151
Streptomyces_RBGC_408704	323.77358490566036	23	terpene (partial overlap)	0.03 +- 0.02	True	16 PF00288 PF00348 PF00368 PF01070 PF01154 PF01593 PF08540 PF08541 PF08544 PF08545 PF18376 TIGR00549 TIGR01220 TIGR01240 TIGR01835 TIGR02151
Streptomyces_RBGC_335219	532.125	23	terpene (partial overlap)	0.02 +- 0.02	True	16 PF00288 PF00348 PF00368 PF01070 PF01154 PF01593 PF08540 PF08541 PF08544 PF08545 PF18376 TIGR00549 TIGR01220 TIGR01240 TIGR01835 TIGR02151
Streptomyces_RBGC_115490	390.0000000000001	23	terpene (partial overlap)	0.03 +- 0.03	True	16 PF00288 PF00348 PF00368 PF01070 PF01154 PF01593 PF08540 PF08541 PF08544 PF08545 PF18376 TIGR00549 TIGR01220 TIGR01240 TIGR01835 TIGR02151
Streptomyces_RBGC_514910	817.1428571428571	23	terpene (partial overlap)	0.01 +- 0.02	True	16 PF00288 PF00348 PF00368 PF01070 PF01154 PF01593 PF08540 PF08541 PF08544 PF08545 PF18376 TIGR00549 TIGR01220 TIGR01240 TIGR01835 TIGR02151