precursor_jaccard_groups_9155

precursor_jaccard_groups_9155

Back to index

Entry name: precursor_jaccard_groups_9155
Common denominator: Overlap in jaccard and precursor pairs
Number of operons: 5
Average COG: 0.02 +- 0.10

Common protein domains
Domain ID	Domain name	Times found
TIGR01263	4-hydroxyphenylpyruvate dioxygenase	5/5
TIGR00652	diaminopimelate epimerase	5/5
PF18603	L-amino acid ligase C-terminal domain 2	5/5
PF18130	ATP-grasp N-terminal domain	5/5
PF14518	Iron-containing redox enzyme	5/5
PF14226	non-haem dioxygenase in morphine synthesis N-terminal	5/5
PF13535	ATP-grasp domain	5/5
PF13458	Periplasmic binding protein	5/5
PF12399	Branched-chain amino acid ATP-binding cassette transporter	5/5
PF10014	2OG-Fe dioxygenase	5/5
PF08241	Methyltransferase domain	5/5
PF07859	alpha/beta hydrolase fold	5/5
PF07690	Major Facilitator Superfamily	5/5
PF05721	Phytanoyl-CoA dioxygenase (PhyH)	5/5
PF05195	Aminopeptidase P, N-terminal domain	5/5
PF04879	Molybdopterin oxidoreductase Fe4S4 domain	5/5
PF03328	HpcH/HpaI aldolase/citrate lyase family	5/5
PF03171	2OG-Fe(II) oxygenase superfamily	5/5
PF02653	Branched-chain amino acid transport system / permease component	5/5
PF02423	Ornithine cyclodeaminase/mu-crystallin family	5/5
PF02153	Prephenate dehydrogenase	5/5
PF01678	Diaminopimelate epimerase	5/5
PF01575	MaoC like domain	5/5
PF01568	Molydopterin dinucleotide binding domain	5/5
PF01425	Amidase	5/5
PF01070	FMN-dependent dehydrogenase	5/5
PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	5/5
PF00892	EamA-like transporter family	5/5
PF00682	HMGL-like	5/5
PF00557	Metallopeptidase family M24	5/5
PF00384	Molybdopterin oxidoreductase	5/5
PF00248	Aldo/keto reductase family	5/5
PF00155	Aminotransferase class I and II	5/5
PF00005	ABC transporter	5/5

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains	Nr of known RiPP domains
Streptomyces_RBGC_432634	2969.11475409836	49	t3pks (partial overlap)	0.01 +- 0.01	True	34 PF00005 PF00155 PF00248 PF00384 PF00557 PF00682 PF00892 PF00903 PF01070 PF01425 PF01568 PF01575 PF01678 PF02153 PF02423 PF02653 PF03171 PF03328 PF04879 PF05195 PF05721 PF07690 PF07859 PF08241 PF10014 PF12399 PF13458 PF13535 PF14226 PF14518 PF18130 PF18603 TIGR00652 TIGR01263	0
Streptomyces_RBGC_553367	2822.8571428571436	48	t3pks (partial overlap)	0.01 +- 0.02	True	34 PF00005 PF00155 PF00248 PF00384 PF00557 PF00682 PF00892 PF00903 PF01070 PF01425 PF01568 PF01575 PF01678 PF02153 PF02423 PF02653 PF03171 PF03328 PF04879 PF05195 PF05721 PF07690 PF07859 PF08241 PF10014 PF12399 PF13458 PF13535 PF14226 PF14518 PF18130 PF18603 TIGR00652 TIGR01263	0
Streptomyces_RBGC_586857	882.3599999999999	48	t3pks (partial overlap)	0.04 +- 0.15	True	34 PF00005 PF00155 PF00248 PF00384 PF00557 PF00682 PF00892 PF00903 PF01070 PF01425 PF01568 PF01575 PF01678 PF02153 PF02423 PF02653 PF03171 PF03328 PF04879 PF05195 PF05721 PF07690 PF07859 PF08241 PF10014 PF12399 PF13458 PF13535 PF14226 PF14518 PF18130 PF18603 TIGR00652 TIGR01263	0
Streptomyces_RBGC_534124	972.8089887640451	47	t3pks (partial overlap)	0.04 +- 0.16	True	34 PF00005 PF00155 PF00248 PF00384 PF00557 PF00682 PF00892 PF00903 PF01070 PF01425 PF01568 PF01575 PF01678 PF02153 PF02423 PF02653 PF03171 PF03328 PF04879 PF05195 PF05721 PF07690 PF07859 PF08241 PF10014 PF12399 PF13458 PF13535 PF14226 PF14518 PF18130 PF18603 TIGR00652 TIGR01263	0
Streptomyces_RBGC_330315	2309.61038961039	48	t3pks (partial overlap)	0.02 +- 0.02	True	34 PF00005 PF00155 PF00248 PF00384 PF00557 PF00682 PF00892 PF00903 PF01070 PF01425 PF01568 PF01575 PF01678 PF02153 PF02423 PF02653 PF03171 PF03328 PF04879 PF05195 PF05721 PF07690 PF07859 PF08241 PF10014 PF12399 PF13458 PF13535 PF14226 PF14518 PF18130 PF18603 TIGR00652 TIGR01263	0