GCF_000819545.1

RiPP BGCs Streptomyces nodosus

Entry name: Streptomyces nodosus
Common denominator: Grouped by genome
Number of operons: 2
Average COG: 0.03 +- 0.05

Common protein domains
Domain ID	Domain name	Times found
TIGR01910	peptidase, ArgE/DapE family	1/2
PF17853	GGDEF-like domain	1/2
PF13669	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	1/2
PF13561	Enoyl-(Acyl carrier protein) reductase	1/2
PF13556	PucR C-terminal helix-turn-helix domain	1/2
PF13516	Leucine Rich repeat	1/2
PF13203	Putative metallopeptidase domain	1/2
PF09967	VWA-like domain (DUF2201)	1/2
PF09084	NMT1/THI5 like	1/2
PF08450	SMP-30/Gluconolactonase/LRE-like region	1/2
PF07905	Purine catabolism regulatory protein-like family	1/2
PF07728	AAA domain (dynein-related subfamily)	1/2
PF06094	Gamma-glutamyl cyclotransferase, AIG2-like	1/2
PF04909	Amidohydrolase	1/2
PF02780	Transketolase, C-terminal domain	1/2
PF02779	Transketolase, pyrimidine binding domain	1/2
PF01979	Amidohydrolase family	1/2
PF01546	Peptidase family M20/M25/M40	1/2
PF01019	Gamma-glutamyltranspeptidase	1/2
PF00676	Dehydrogenase E1 component	1/2
PF00528	Binding-protein-dependent transport system inner membrane component	1/2
PF00005	ABC transporter	1/2

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains	Nr of known RiPP domains
Streptomyces_RBGC_445401	21.864406779661014	16	None found	0.09 +- 0.07	True	4 PF07728 PF09967 PF13203 PF13516	0
Streptomyces_RBGC_428966	2408.0	25	None found	0.01 +- 0.00	True	18 PF00005 PF00528 PF00676 PF01019 PF01546 PF01979 PF02779 PF02780 PF04909 PF06094 PF07905 PF08450 PF09084 PF13556 PF13561 PF13669 PF17853 TIGR01910	0