GCF_001270565.1

RiPP BGCs Streptomyces virginiae

Entry name: Streptomyces virginiae
Common denominator: Grouped by genome
Number of operons: 2
Average COG: 0.06 +- 0.16

Common protein domains
Domain ID	Domain name	Times found
TIGR03797	NHLM bacteriocin system ABC transporter, ATP-binding protein	1/2
TIGR03796	NHLM bacteriocin system ABC transporter, peptidase/ATP-binding protein	1/2
PF13459	4Fe-4S single cluster domain	1/2
PF13437	HlyD family secretion protein	1/2
PF10604	Polyketide cyclase / dehydrase and lipid transport	1/2
PF10589	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region	1/2
PF08386	TAP-like protein	1/2
PF07690	Major Facilitator Superfamily	1/2
PF05013	N-formylglutamate amidohydrolase	1/2
PF03640	Secreted repeat of unknown function	1/2
PF03412	Peptidase C39 family	1/2
PF03055	Retinal pigment epithelial membrane protein	1/2
PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit	1/2
PF00664	ABC transporter transmembrane region	1/2
PF00561	alpha/beta hydrolase fold	1/2
PF00440	Bacterial regulatory proteins, tetR family	1/2
PF00005	ABC transporter	1/2

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains	Nr of known RiPP domains
Streptomyces_RBGC_523861	273.6842105263158	21	terpene (partial overlap)	0.09 +- 0.19	True	11 PF00005 PF00440 PF00664 PF03055 PF03412 PF05013 PF07690 PF10604 PF13437 TIGR03796 TIGR03797	0
Streptomyces_RBGC_267189	243.75	16	None found	0.01 +- 0.00	True	6 PF00561 PF01512 PF03640 PF08386 PF10589 PF13459	0