GCF_001865795.1

RiPP BGCs Streptomyces albidoflavus

Entry name: Streptomyces albidoflavus
Common denominator: Grouped by genome
Number of operons: 2
Average COG: 0.06 +- 0.06

Common protein domains
Domain ID	Domain name	Times found
PF00005	ABC transporter	2/2
TIGR03882	bacteriocin biosynthesis cyclodehydratase domain	1/2
TIGR03605	SagB-type dehydrogenase domain	1/2
TIGR03604	thiazole/oxazole-forming peptide maturase, SagD family component	1/2
TIGR02937	RNA polymerase sigma factor, sigma-70 family	1/2
TIGR01746	thioester reductase domain	1/2
TIGR01733	amino acid adenylation domain	1/2
TIGR01525	heavy metal translocating P-type ATPase	1/2
TIGR00747	3-oxoacyl-[acyl-carrier-protein] synthase III	1/2
PF14028	Lantibiotic biosynthesis dehydratase C-term	1/2
PF13193	AMP-binding enzyme C-terminal domain	1/2
PF13191	AAA ATPase domain	1/2
PF10862	FcoT-like thioesterase domain	1/2
PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III	1/2
PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal	1/2
PF08281	Sigma-70, region 4	1/2
PF07993	Male sterility protein	1/2
PF07690	Major Facilitator Superfamily	1/2
PF05118	Aspartyl/Asparaginyl beta-hydroxylase	1/2
PF04738	Lantibiotic dehydratase, N terminus	1/2
PF04542	Sigma-70 region 2	1/2
PF04314	Copper chaperone PCu(A)C	1/2
PF03929	PepSY-associated TM region	1/2
PF03704	Bacterial transcriptional activator domain	1/2
PF02668	Taurine catabolism dioxygenase TauD, TfdA family	1/2
PF02624	YcaO cyclodehydratase, ATP-ad Mg2+-binding	1/2
PF01965	DJ-1/PfpI family	1/2
PF01794	Ferric reductase like transmembrane component	1/2
PF01497	Periplasmic binding protein	1/2
PF01061	ABC-2 type transporter	1/2
PF01032	FecCD transport family	1/2
PF00881	Nitroreductase family	1/2
PF00702	haloacid dehalogenase-like hydrolase	1/2
PF00668	Condensation domain	1/2
PF00550	Phosphopantetheine attachment site	1/2
PF00501	AMP-binding enzyme	1/2
PF00486	Transcriptional regulatory protein, C terminal	1/2
PF00403	Heavy-metal-associated domain	1/2
PF00122	E1-E2 ATPase	1/2

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains	Nr of known RiPP domains
Streptomyces_RBGC_201889	1190.769230769231	29	nrps (total overlap)	0.03 +- 0.04	True	28 PF00005 PF00122 PF00403 PF00501 PF00550 PF00668 PF00702 PF01032 PF01497 PF01794 PF01965 PF02668 PF03929 PF04314 PF04542 PF05118 PF07690 PF07993 PF08281 PF08541 PF08545 PF10862 PF13193 TIGR00747 TIGR01525 TIGR01733 TIGR01746 TIGR02937	0
Streptomyces_RBGC_495256	283.79999999999995	22	thiopeptide (total overlap)	0.10 +- 0.08	True	12 PF00005 PF00486 PF00881 PF01061 PF02624 PF03704 PF04738 PF13191 PF14028 TIGR03604 TIGR03605 TIGR03882	7