GCF_004295505.1

RiPP BGCs Streptomyces tsukubensis

Entry name: Streptomyces tsukubensis
Common denominator: Grouped by genome
Number of operons: 2
Average COG: 0.09 +- 0.07

Common protein domains
Domain ID	Domain name	Times found
TIGR01733	amino acid adenylation domain	1/2
PF18029	Glyoxalase-like domain	1/2
PF16197	Ketoacyl-synthetase C-terminal extension	1/2
PF14765	Polyketide synthase dehydratase	1/2
PF13471	Transglutaminase-like superfamily	1/2
PF13193	AMP-binding enzyme C-terminal domain	1/2
PF08713	DNA alkylation repair enzyme	1/2
PF08659	KR domain	1/2
PF07690	Major Facilitator Superfamily	1/2
PF07478	D-ala D-ala ligase C-terminus	1/2
PF05402	Coenzyme PQQ synthesis protein D (PqqD)	1/2
PF02801	Beta-ketoacyl synthase, C-terminal domain	1/2
PF01820	D-ala D-ala ligase N-terminus	1/2
PF01494	FAD binding domain	1/2
PF00975	Thioesterase domain	1/2
PF00850	Histone deacetylase domain	1/2
PF00848	Ring hydroxylating alpha subunit (catalytic domain)	1/2
PF00733	Asparagine synthase	1/2
PF00698	Acyl transferase domain	1/2
PF00551	Formyl transferase	1/2
PF00550	Phosphopantetheine attachment site	1/2
PF00501	AMP-binding enzyme	1/2
PF00355	Rieske [2Fe-2S] domain	1/2
PF00155	Aminotransferase class I and II	1/2
PF00109	Beta-ketoacyl synthase, N-terminal domain	1/2

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains	Nr of known RiPP domains
Streptomyces_RBGC_173737	55.285714285714285	14	None found	0.05 +- 0.03	True	3 PF00733 PF05402 PF13471	3
Streptomyces_RBGC_576728	202.6178010471204	27	None found	0.10 +- 0.07	True	22 PF00109 PF00155 PF00355 PF00501 PF00550 PF00551 PF00698 PF00848 PF00850 PF00975 PF01494 PF01820 PF02801 PF07478 PF07690 PF08659 PF08713 PF13193 PF14765 PF16197 PF18029 TIGR01733	0