precursor_groups_114

Back to index

Entry name: precursor_groups_114
Common denominator: Precursor BLAST
Number of operons: 4
Average COG: 0.06 +- 0.07

Precursor alignment

Common protein domains
Domain ID	Domain name	Times found
TIGR01234	ribulokinase	2/4
PF18029	Glyoxalase-like domain	2/4
PF14200	Ricin-type beta-trefoil lectin domain-like	2/4
PF11762	L-arabinose isomerase C-terminal domain	2/4
PF07690	Major Facilitator Superfamily	2/4
PF06964	Alpha-L-arabinofuranosidase C-terminal domain	2/4
PF06772	Bacterial low temperature requirement A protein (LtrA)	2/4
PF02782	FGGY family of carbohydrate kinases, C-terminal domain	2/4
PF02610	L-arabinose isomerase	2/4
PF01547	Bacterial extracellular solute-binding protein	2/4
PF00596	Class II Aldolase and Adducin N-terminal domain	2/4
PF00561	alpha/beta hydrolase fold	2/4
PF00528	Binding-protein-dependent transport system inner membrane component	2/4
PF00370	FGGY family of carbohydrate kinases, N-terminal domain	2/4
PF00296	Luciferase-like monooxygenase	2/4
PF00106	short chain dehydrogenase	2/4

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains
Streptomyces_RBGC_61828	116.99999999999999	20	None found	0.09 +- 0.09	True	11 PF00370 PF00528 PF00596 PF01547 PF02610 PF02782 PF06964 PF11762 PF14200 PF18029 TIGR01234
Streptomyces_RBGC_150014	344.0	20	None found	0.03 +- 0.02	True	5 PF00106 PF00296 PF00561 PF06772 PF07690
Streptomyces_RBGC_710677	301.9148936170212	22	None found	0.07 +- 0.08	True	11 PF00370 PF00528 PF00596 PF01547 PF02610 PF02782 PF06964 PF11762 PF14200 PF18029 TIGR01234
Streptomyces_RBGC_705520	344.0	20	None found	0.03 +- 0.02	True	5 PF00106 PF00296 PF00561 PF06772 PF07690