precursor_groups_119

Back to index

Entry name: precursor_groups_119
Common denominator: Precursor BLAST
Number of operons: 2
Average COG: 0.07 +- 0.07

Precursor alignment

Common protein domains
Domain ID	Domain name	Times found
TIGR02493	pyruvate formate-lyase 1-activating enzyme	2/2
TIGR01828	pyruvate, phosphate dikinase	2/2
TIGR01255	formate acetyltransferase	2/2
PF14325	Domain of unknown function (DUF4383)	2/2
PF13411	MerR HTH family regulatory protein	2/2
PF04055	Radical SAM superfamily	2/2
PF02901	Pyruvate formate lyase-like	2/2
PF02896	PEP-utilising enzyme, TIM barrel domain	2/2
PF02607	B12 binding domain	2/2
PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain	2/2
PF01228	Glycine radical	2/2
PF00582	Universal stress protein family	2/2
PF00391	PEP-utilising enzyme, mobile domain	2/2
PF00106	short chain dehydrogenase	2/2

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains	Nr of known RiPP domains
Streptomyces_RBGC_254913	75.88235294117646	18	None found	0.07 +- 0.07	True	14 PF00106 PF00391 PF00582 PF01228 PF01326 PF02607 PF02896 PF02901 PF04055 PF13411 PF14325 TIGR01255 TIGR01828 TIGR02493	1
Streptomyces_RBGC_201763	75.88235294117646	18	None found	0.07 +- 0.07	True	14 PF00106 PF00391 PF00582 PF01228 PF01326 PF02607 PF02896 PF02901 PF04055 PF13411 PF14325 TIGR01255 TIGR01828 TIGR02493	1