precursor_groups_2

precursor_groups_2

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Entry name: precursor_groups_2
Common denominator: Precursor BLAST
Number of operons: 6
Average COG: 0.05 +- 0.12

Precursor alignment

Common protein domains
Domain ID	Domain name	Times found
PF04149	Domain of unknown function (DUF397)	5/6
TIGR01762	chlorinating enzyme	4/6
TIGR01733	amino acid adenylation domain	4/6
TIGR01509	HAD hydrolase, family IA, variant 3	4/6
TIGR01444	methyltransferase, FkbM family	4/6
TIGR00843	benzoate transporter	4/6
PF16990	Carbohydrate binding module (family 35)	4/6
PF13560	Helix-turn-helix domain	4/6
PF13535	ATP-grasp domain	4/6
PF13454	FAD-NAD(P)-binding	4/6
PF13419	Haloacid dehalogenase-like hydrolase	4/6
PF13193	AMP-binding enzyme C-terminal domain	4/6
PF07691	PA14 domain	4/6
PF06439	Domain of Unknown Function (DUF1080)	4/6
PF05721	Phytanoyl-CoA dioxygenase (PhyH)	4/6
PF05050	Methyltransferase FkbM domain	4/6
PF03594	Benzoate membrane transport protein	4/6
PF02771	Acyl-CoA dehydrogenase, N-terminal domain	4/6
PF02770	Acyl-CoA dehydrogenase, middle domain	4/6
PF01116	Fructose-bisphosphate aldolase class-II	4/6
PF00975	Thioesterase domain	4/6
PF00892	EamA-like transporter family	4/6
PF00550	Phosphopantetheine attachment site	4/6
PF00501	AMP-binding enzyme	4/6
PF00441	Acyl-CoA dehydrogenase, C-terminal domain	4/6

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains	Nr of known RiPP domains
Streptomyces_RBGC_602541	163.4851485148515	26	bacteriocin (total overlap)	0.05 +- 0.09	True	25 PF00441 PF00501 PF00550 PF00892 PF00975 PF01116 PF02770 PF02771 PF03594 PF04149 PF05050 PF05721 PF06439 PF07691 PF13193 PF13419 PF13454 PF13535 PF13560 PF16990 TIGR00843 TIGR01444 TIGR01509 TIGR01733 TIGR01762	0
Streptomyces_RBGC_491977	260.0	14	None found	0.01 +- 0.00	True	4 PF02449 PF04149 PF07745 PF08532	0
Streptomyces_RBGC_374820	163.4851485148515	26	bacteriocin (total overlap)	0.05 +- 0.09	True	25 PF00441 PF00501 PF00550 PF00892 PF00975 PF01116 PF02770 PF02771 PF03594 PF04149 PF05050 PF05721 PF06439 PF07691 PF13193 PF13419 PF13454 PF13535 PF13560 PF16990 TIGR00843 TIGR01444 TIGR01509 TIGR01733 TIGR01762	0
Streptomyces_RBGC_250930	189.0909090909091	26	bacteriocin (total overlap)	0.04 +- 0.10	True	25 PF00441 PF00501 PF00550 PF00892 PF00975 PF01116 PF02770 PF02771 PF03594 PF04149 PF05050 PF05721 PF06439 PF07691 PF13193 PF13419 PF13454 PF13535 PF13560 PF16990 TIGR00843 TIGR01444 TIGR01509 TIGR01733 TIGR01762	0
Streptomyces_RBGC_27518	96.1849710982659	26	other (total overlap)	0.08 +- 0.19	True	25 PF00441 PF00501 PF00550 PF00892 PF00975 PF01116 PF02770 PF02771 PF03594 PF04149 PF05050 PF05721 PF06439 PF07691 PF13193 PF13419 PF13454 PF13535 PF13560 PF16990 TIGR00843 TIGR01444 TIGR01509 TIGR01733 TIGR01762	0
Streptomyces_RBGC_204415	834.1666666666666	16	bacteriocin (partial overlap)	0.01 +- 0.01	True	13 PF00005 PF00664 PF00881 PF01828 PF02624 PF03412 PF03795 PF13437 TIGR03604 TIGR03605 TIGR03796 TIGR03797 TIGR03882	5