precursor_groups_42674

Back to index

Entry name: precursor_groups_42674
Common denominator: Precursor BLAST
Number of operons: 2
Average COG: 0.08 +- 0.18

Precursor alignment

Common protein domains
Domain ID	Domain name	Times found
TIGR01928	o-succinylbenzoate synthase	2/2
TIGR01727	oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain	2/2
PF17676	LD-carboxypeptidase C-terminal domain	2/2
PF13561	Enoyl-(Acyl carrier protein) reductase	2/2
PF13378	Enolase C-terminal domain-like	2/2
PF12831	FAD dependent oxidoreductase	2/2
PF08352	Oligopeptide/dipeptide transporter, C-terminal region	2/2
PF07883	Cupin domain	2/2
PF07690	Major Facilitator Superfamily	2/2
PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain	2/2
PF02515	CoA-transferase family III	2/2
PF02016	LD-carboxypeptidase N-terminal domain	2/2
PF01546	Peptidase family M20/M25/M40	2/2
PF01381	Helix-turn-helix	2/2
PF01380	SIS domain	2/2
PF00701	Dihydrodipicolinate synthetase family	2/2
PF00528	Binding-protein-dependent transport system inner membrane component	2/2
PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle	2/2
PF00378	Enoyl-CoA hydratase/isomerase	2/2
PF00171	Aldehyde dehydrogenase family	2/2
PF00005	ABC transporter	2/2

Data per operon
Operon name	Score	Number of genes	antiSMASH overlap	COG score	Passed filter	Found domains	Nr of known RiPP domains
Streptomyces_RBGC_211139	261.79723502304154	30	None found	0.09 +- 0.19	True	21 PF00005 PF00171 PF00378 PF00496 PF00528 PF00701 PF01380 PF01381 PF01546 PF02016 PF02515 PF02746 PF07690 PF07883 PF08352 PF12831 PF13378 PF13561 PF17676 TIGR01727 TIGR01928	0
Streptomyces_RBGC_133574	320.3011363636363	30	None found	0.07 +- 0.17	True	21 PF00005 PF00171 PF00378 PF00496 PF00528 PF00701 PF01380 PF01381 PF01546 PF02016 PF02515 PF02746 PF07690 PF07883 PF08352 PF12831 PF13378 PF13561 PF17676 TIGR01727 TIGR01928	0