decRiPPter is a tool for explorative genome mining for novel RiPP families.
Authors:
Alexander M. Kloosterman, Peter Cimermancic, Somayah S. Elsayed, Chao Du, Michalis Hadjithomas, Mohamed S. Donia, Michael A. Fischbach, Gilles P. van Wezel, Marnix H. Medema
For more information, see:
Preprint on bioRxiv
GitHub repository
Below are the filtered results of decRiPPter's analysis of 1,295 Streptomyces genomes.
Results from mild filter
Gene clusters with at least two biosynthetic enzymes, one transporter, and an average COG-score of 0.25 or less
Results from strict filter
Gene clusters with at least two biosynthetic enzymes, one transporter, one regulator, one peptidase and an average COG-score of 0.10 or less
Curated candidates
Manually curated candidates out of the strictly filtered set.